Envision Mapping was sub-contracted by Heriot Watt University for Scottish Natural Heritage (SNH) to undertake broad scale subtidal biotope mapping of Sullom Voe cSAC. Sullom Voe in the Shetland Isles is the most northerly site in the UK to be selected as a representative of large shallow inlets and bays, and within the site series it is the only Scottish example of a ria (known locally as a ?voe?). The boreal-arctic (northern) species-rich communities of Sullom Voe are restricted to Shetland voes and are not represented elsewhere in the SAC series. The purpose was to map the main features and biota using acoustic remote sensing techniques combined with grab and video sampling.

PURPOSE: The objective of the program is to gather environmental coastal data to better understand fluctuations in water temperature and its effect on coastal marine species. DESCRIPTION: Bottom and surface water temperatures are monitored in coastal waters of the southern Gulf of St. Lawrence using electronic recording devices attached to navigational buoys or moorings and set to record every two hours. PARAMETERS COLLECTED: temperature (environmental); point (spatial) NOTES ON QUALITY CONTROL: Data are checked for irregularities. SAMPLING METHODS: Temperature recording devices are installed by fishermen, DFO staff and, since 2000, by the Canadian Coast Guard staff. USE LIMITATION: To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.

Fish Habitat Assessment Output: 8 of 16 High Water Level (75.4m ASL) - Juvenile/Adult Habitat - Low Vegetation Association Species (Coldwater) Habitat suitability was assessed for the Bay of Quinte Area of Concern, at a 3 m grid resolution, using the Habitat Ecosystem Assessment Tool (HEAT), temperature algorithms, vegetation models, and water level input. Habitat classifications were based on three variables: depth (elevation), vegetation, and substrate; and modified by temperature suitabilities. The final suitability maps were based on documented habitat and temperature associations for the fish in the area. Different life stages (spawning requirements, nursery habitat, adult habitat) were modeled for the years of 1972-2011. Suitability values were scaled from 0 (not suitable) to 1 (highly suitable) and converted to suitability classes of very low, low, medium, and high. The final maps for each guild – life stage combination are maximum suitability values from the 39-year period modelled.

Fish Habitat Assessment Output: 14 of 16 Average Water Level (75.0m ASL) - Juvenile/Adult Habitat - Low Vegetation Association Species (Warmwater Guild) Habitat suitability was assessed for the Bay of Quinte Area of Concern, at a 3 m grid resolution, using the Habitat Ecosystem Assessment Tool (HEAT), temperature algorithms, vegetation models, and water level input. Habitat classifications were based on three variables: depth (elevation), vegetation, and substrate; and modified by temperature suitabilities. The final suitability maps were based on documented habitat and temperature associations for the fish in the area. Different life stages (spawning requirements, nursery habitat, adult habitat) were modeled for the years of 1972-2011. Suitability values were scaled from 0 (not suitable) to 1 (highly suitable) and converted to suitability classes of very low, low, medium, and high. The final maps for each guild – life stage combination are maximum suitability values from the 39-year period modelled.

Fish Habitat Assessment Output: 9 of 16 Average Water Level (75.0m ASL) - Spawning Habitat - High Vegetation Association Species (All Temperature Windows) Habitat suitability was assessed for the Bay of Quinte Area of Concern, at a 3 m grid resolution, using the Habitat Ecosystem Assessment Tool (HEAT), temperature algorithms, vegetation models, and water level input. Habitat classifications were based on three variables: depth (elevation), vegetation, and substrate; and modified by temperature suitabilities. The final suitability maps were based on documented habitat and temperature associations for the fish in the area. Different life stages (spawning requirements, nursery habitat, adult habitat) were modeled for the years of 1972-2011. Suitability values were scaled from 0 (not suitable) to 1 (highly suitable) and converted to suitability classes of very low, low, medium, and high. The final maps for each guild – life stage combination are maximum suitability values from the 39-year period modelled.

Fish Habitat Assessment Output: 15 of 16 Average Water Level (75.0m ASL) - Juvenile/Adult Habitat - Low Vegetation Association Species (Coolwater Guild) Habitat suitability was assessed for the Bay of Quinte Area of Concern, at a 3 m grid resolution, using the Habitat Ecosystem Assessment Tool (HEAT), temperature algorithms, vegetation models, and water level input. Habitat classifications were based on three variables: depth (elevation), vegetation, and substrate; and modified by temperature suitabilities. The final suitability maps were based on documented habitat and temperature associations for the fish in the area. Different life stages (spawning requirements, nursery habitat, adult habitat) were modeled for the years of 1972-2011. Suitability values were scaled from 0 (not suitable) to 1 (highly suitable) and converted to suitability classes of very low, low, medium, and high. The final maps for each guild – life stage combination are maximum suitability values from the 39-year period modelled.

Eelgrass (Zostera marina) is important to waterfowl such as Atlantic Brant (Branta bernicla hrota), Canada Goose (Branta canadensis), American Black Duck (Anas rubripes), Common Goldeneye (Bucephala clangula) and Barrow's Goldeneye (Bucephala islandica). In New Brunswick eelgrass can be found along the Gulf of St. Lawrence, in protected harbours. Within this dataset are the results of eelgrass land-cover classifications using either satellite or aerial photography for seven harbours: Bouctouche (46 30’N, 64 39’W); Miscou (47.90 N, -64.55 W); Neguac (47.25 N, -65.03 W); Richibucto (46.70 N, -64.80 W); Saint-Simon (47.77 N, -64.76 W); Tracadie (47.55 N, -64.88 W); and Cocagne (46.370 N, -64.600 W). Information on each dataset is provided: 1. Bouctouche This dataset contains results from an eelgrass classification for Bouctouche Bay, New Brunswick. True colour aerial photography at 57 centimetre resolution was collected on September 2, 2009 by Nortek Resources of Thorburn, Nova Scotia (http://www.nortekresources.com/). Image classification was conducted using eCognition Developer v. 8 Software, which first segments the image into spectrally similar units, which were then classified manually. Additionally, the Department of Fisheries and Oceans (Gulf Region, Moncton, NB) conducted a visual field survey in the same field season at 688 sites. Two-thirds of these sites were used to assist in image classification, while the remainder were used to assess accuracy. Three classes were identified: i. Good Quality Eelgrass: relatively dense, clean, green blades with minimal epiphytes or algal growth. ii. Medium Quality Eelgrass: predominately green blades that may have some epiphyte or algal growth. These stands can be less or equally dense as Good Quality Eelgrass, but the best grasses are certainly not as abundant. iii. Eelgrass Absent/Poor Quality: eelgrass is absent, or if it is present it is typically covered with epiphytes or other algae or dying or dead. Eelgrass was classified correctly 83.7% of the time in a fuzzy accuracy assessment technique, whereby those classes that were ‘off’ by one class, e.g. Good Quality eelgrass classed as Medium Quality, were given half credit towards the overall accuracy. Of 187 sites that were within the classification area, 131 were correct, 51 were "one-off", and 5 were incorrect [(131 + (51/2))/ 187 = 0.837]. 2. Miscou True colour aerial photography at 57 centimetre resolution was collected on August 20th and 24th, 2009 by Nortek Resources of Thorburn, Nova Scotia (http://www.nortekresources.com/). Image classification was conducted using eCognition Developer v. 8 Software, which first segments the image into spectrally similar units, which were then classified manually. Additionally, the Department of Fisheries and Oceans (Gulf Region, Moncton, NB) conducted a visual field survey in the same field season at 103 sites. From these sites 70% were used to assist in image classification, while the remainder were used to assess accuracy. Three classes were identified: i. Good Quality Eelgrass: relatively dense, clean, green blades with minimal epiphytes or algal growth. ii. Medium Quality Eelgrass: predominately green blades that may have some epiphyte or algal growth. These stands can be less or equally dense as Good Quality Eelgrass, but the best grasses are certainly not as abundant. iii. Eelgrass Absent/Poor Quality: eelgrass is absent, or if it is present it is typically covered with epiphytes or other algae or dying or dead. Eelgrass was classified correctly 96.7% of the time (30/31 = 0.967). 3. Neguac This dataset contains results from an eelgrass classification for Neguac Bay, New Brunswick. True colour aerial photography at 57 centimetre resolution was collected on September 2, 2009 by Nortek Resources of Thorburn, Nova Scotia (http://www.nortekresources.com/). Image classification was conducted using eCognition Developer v. 8 Software, which first segments the image into spectrally similar units, which were then classified manually. Additionally, the Department of Fisheries and Oceans (Gulf Region, Moncton, NB) conducted a visual field survey in the same field season at 126 sites. Two-thirds of these sites were used to assist in image classification, while the remainder were used to assess accuracy. Three classes were identified: i. Good Quality Eelgrass: relatively dense, clean, green blades with minimal epiphytes or algal growth. ii. Medium Quality Eelgrass: predominately green blades that may have some epiphyte or algal growth. These stands can be less or equally dense as Good Quality Eelgrass, but the best grasses are certainly not as abundant. iii. Eelgrass Absent/Poor Quality: eelgrass is absent, or if it is present it is typically covered with epiphytes or other algae or dying or dead. Eelgrass was classified correctly 81% of the time in a fuzzy accuracy assessment technique, whereby those classes that were ‘off’ by one class, e.g. Good Quality eelgrass classed as Medium Quality, were given half credit towards the overall accuracy. Of 39 sites that were within the classification area, 27 were correct, 9 were "one-off", and 3 were incorrect [(27 + (9/2))/ 39 = 0.81]. 4. Richibucto Eelgrass classification in Richibucto Harbour, New Brunswick. Derived from a Quickbird satellite image collected on August 28, 2007 at as close to low-tide as possible. Quickbird's ground resolution is 2.4 m. Classification was objected-oriented using Definiens software. Accuracy was 81.5%. Data used for accuracy and training was collected along transects using a differential GPS positioned towfish holding sidescan sonar, and a video camera that was later transcribed as XY points to describe eel-grass presence. 5. Saint-Simon An eelgrass distribution map was classified from remotely sensed imagery in Shippagan Harbour, New Brunswick. Derived from a Quickbird satellite image collected on July 27, 2007 at as close to low-tide as possible. Classification was objected-oriented using Definiens software. Data used for accuracy and training was collected along transects using a differential GPS positioned towfish holding sidescan sonar, and a video camera that was later transcribed as XY points to describe eel-grass presence. 6. Tracadie This dataset contains results from an eelgrass classification for Tracadie Bay, New Brunswick. True colour aerial photography at 57 centimetre resolution was collected on September 2, 2009 by Nortek Resources of Thorburn, Nova Scotia (http://www.nortekresources.com/). Image classification was conducted using eCognition Developer v. 8 Software, which first segments the image into spectrally similar units, which were then classified manually. Additionally, the Department of Fisheries and Oceans (Gulf Region, Moncton, NB) conducted a visual field survey in the same field season at 101 sites. Approximately two-thirds of these sites were used to assist in image classification, while the remainder was used to assess accuracy. Three classes were identified: i. Good Quality Eelgrass: relatively dense, clean, green blades with minimal epiphytes or algal growth. ii. Medium Quality Eelgrass: predominately green blades that may have some epiphyte or algal growth. These stands can be less or equally dense as Good Quality Eelgrass, but the best grasses are certainly not as abundant. iii. Eelgrass Absent/Poor Quality: eelgrass is absent, or if it is present it is typically covered with epiphytes or other algae or dying or dead. Eelgrass was classified correctly 79.3% of the time in a fuzzy accuracy assessment technique, whereby those classes that were ‘off’ by one class, e.g. Good Quality eelgrass classed as Medium Quality, were given half credit towards the overall accuracy. Of 29 sites that were within the classification area, 18 were correct, 10 were "one-off", and 1 was incorrect [(18 + (10/2))/ 29 = 0.793]. 7. Cocagne Visible orthorectified aerial photography was used to classify polygons containing eelgrass in Cocagne Harbour. Field data for image training and validation were collected along transects in summer 2008 using a dGPS positioned towfish holding sidescan sonar and a video camera that was later transcribed as XY geographic points to describe eelgrass presence and a qualitative description of density. The area was flown for photography on September 24, 2008. eCognition Developer 8 software was used to segment the imagery, essentially polygons. Polygons were then classified manually for the presence of eelgrass. Using field data revealed eelgrass presence to be mapped correctly 87.2% of the time.

Fish Habitat Assessment Output: 5 of 16 High Water Level (75.4m ASL) - Juvenile/Adult Habitat - High Vegetation Association Species (All Thermal Guilds) Habitat suitability was assessed for the Bay of Quinte Area of Concern, at a 3 m grid resolution, using the Habitat Ecosystem Assessment Tool (HEAT), temperature algorithms, vegetation models, and water level input. Habitat classifications were based on three variables: depth (elevation), vegetation, and substrate; and modified by temperature suitabilities. The final suitability maps were based on documented habitat and temperature associations for the fish in the area. Different life stages (spawning requirements, nursery habitat, adult habitat) were modeled for the years of 1972-2011. Suitability values were scaled from 0 (not suitable) to 1 (highly suitable) and converted to suitability classes of very low, low, medium, and high. The final maps for each guild – life stage combination are maximum suitability values from the 39-year period modelled.

This dataset includes water chemistry data collected from five of the six lakes as part of the Northwestern Ontario Size Series project in 1987 and 1990 including species of nitrogen and phosphorus, carbon, chlorophyll a, conductivity, soluble reactive silica, chloride, sulphate, conductivity, sodium, potassium, magnesium, calcium, pH, alkalinity and organic acids

Fetch is a useful proxy for exposure (an important driver of nearshore species distributions) in the absence of a wind-wave model. We derived the first-ever coast-wide estimates of fetch for Pacific Canadian waters. Fetch was calculated for over 41,720 km of the British Columbia coastline, at 50 m intervals, yielding 811,727 nearshore fetch points. Fetch was calculated for five regions in Pacific Canada: Haida Gwaii (HG), Queen Charlotte Strait (QCS), Strait of Georgia (SOG), West Coast Vancouver Island (WCVI), and the North Central Coast (NCC; Prince Rupert to Cape Caution). For all regions, a bearing interval of 5 degrees was used to generate fetch lines for each point along the shoreline, resulting in 72 fetch lines per point. A maximum fetch distance of 200 km was used to ensure the barrier effect of Haida Gwaii was captured. Supplementary information provided includes the fetch geometry calculator script and user guide (Gregr 2014) and a report on the fetch processing objectives, process, and results (Gregr 2015).