PURPOSE: The objective of the sea scallop survey is to obtain fishery independent data on the abundance, size distribution and location of scallops in the southern Gulf of St. Lawrence and to provide science advice on stock status to fishery managers, decision makers and industry stakeholders. DESCRIPTION: The sea scallop research survey is conducted on CCGS MPerley (or chartered vessels) and has stratified random sampling. For each tow (or sample), data is recorded on tow, all specimens caught, geolocation, shell height frequency and biological samples. This monitoring program is currently on-hold. It will resume if a survey is deemed necessary to provide a new or updated science advice in the future. Stock status is currently (2024) in the critical zone. Rebuilding plan to follow. PARAMETERS COLLECTED: Catch number (biological), catch weight (biological), individual lengths (biological), age (biological), meat weight (biological). PHYSICAL SAMPLE DETAILS: A sub-sample of scallop shells is retained and analysed for age determination in the lab. SAMPLING METHODS: From 2012 to 2016, an annual, rotational, multispecies research survey program for scallop in the sGSL was conducted to obtain fishery independent indices of abundance, biomass estimates, and biological characteristics information (shell height, meat weight, sex, clappers). One section of a SFA or the SFA in its entirety was surveyed per year, with the exception of SFA 23 which was excluded because of the low scallop fishing effort reported from this area in recent years. From 2019 to 2023, annual surveys were conducted on the three major beds in the Northumberland Strait (West Point and Cape Tormentine in SFA 22, Pictou in SFA 24), using a similar methodology as the previous surveys. Methodology can be found in the Science Advisory Report and the Research Document listed in the citations list. USE LIMITATION: To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.

PURPOSE: From August 1st to September 11th, 2014, Fisheries and Oceans Canada conducted a baseline survey of marine fishes and their habitats in the southern Canadian Beaufort Sea and Amundsen Gulf as part of the Beaufort Regional Environmental Assessment (BREA) called the Beaufort Sea Marine Fishes Project (BSMFP). Sampling was conducted from the F/V Frosti at 54 stations along 14 transects. Standardized sampling was conducted at pre-determined depth stations (20-1500 m) using benthic trawling nets. The BSMFP is the first research project to use large research trawls to assess the biodiversity and abundance of offshore marine fishes in this area. In total, 42 species of fish were caught. This report contains information on fishing net deployments, catch per unit effort (CPUE), and basic biological data for all fishes caught. DESCRIPTION: Basic biological data for all fish caught during the 2014 BSMFP expedition. Includes identification, weight, length (total, fork, and, standard), liver weight, gonad weight, sex and maturity level. PARAMETERS COLLECTED: family species weight total length fork length standard length liver weight gonad weight sex maturity SAMPLING METHODS: Various trawl types.

PURPOSE: Scope the distribution of Smallmouth Bass in the Miramichi River Watershed using eDNA DESCRIPTION: This dataset contains the results of work undertaken from 2019 to 2024 to scope the extent of the spread of Smallmouth Bass in parts of the Miramichi River Watershed using an eDNA-based species-specific qPCR approach. USE LIMITATION: To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.

Fisheries and Oceans Canada (DFO) conducts an annual summer multidisciplinary scientific survey with a bottom trawl in the Estuary and the northern Gulf of St. Lawrence since 1984. Over the years this survey has been conducted on four vessels: the MV Lady Hammond (1984-1990), the CCGS Alfred Needler (1990-2005), the CCGS Teleost (2004-2021) and the CCGS Cabot (2022-current). It is important to note that the objectives, the methods used and the identification of the species during these surveys have improved over time in response to DFO requests and mandates. The data are therefore not directly comparable between these surveys. The specificities of the missions onboard the CCGS Alfred Needler are described below. Objectives: 1. Assess groundfish and northern shrimp population abundance and condition 2. Assess environmental conditions 3. Conduct a biodiversity inventory of benthic and demersal megafauna 4. Monitor the pelagic ecosystem 5. Collect samples for various research projects Survey description The survey covers the divisions 4R, 4S, 3Pn and the northern part of division 4T of the Northwest Atlantic Fisheries Organization (NAFO). This survey follows a stratified random sampling design and the fishing gear used on the CCGS Alfred Needler is a URI shrimp trawl (81'/114'). Standard trawling tows last 25 minutes, starting from the time the trawl touched the sea floor. Towing speed is 3 knots. Data For each fishing tow, the catch is sorted and weighed by taxa; individuals are then counted and biological data are collected on a subsample. For fish, crab and squid, size and weight are measured by individual and, for some species, sex, gonad maturity, and the weight of certain organs (stomach, liver, gonads) are also evaluated. The soft rays of the anal fin are counted for redfish, and the otoliths are collected for several species such as witch flounder, Atlantic cod, Greenland halibut and Atlantic halibut. A roughly 2-kg shrimp sample is sorted and weighed by species (and by stage of maturity for northern shrimp). The shrimps are measured individually. The other invertebrates are counted (no individual measurements) and photographed. The biological data are divided into 5 files: a “Metadata” file containing set information, a “Catches” file containing catches per set for fish taxa, a “Carbio” file containing biological and morphometric measurements per individual, a “Freql” file containing the length frequency of fish and a “Shrimps” file containing information on shrimp catches. It's important to note that this is raw data. Only sets considered successful are retained. In each set, all species are kept, with a few exceptions. For more information please contact the data management team (gddaiss-dmsaisb@dfo-mpo.gc.ca).

Long-term freshwater quality data from federal and federal-provincial sampling sites throughout Canada's aquatic ecosystems are included in this dataset. Measurements regularly include physical-chemical parameters such as temperature, pH, alkalinity, major ions, nutrients and metals. Collection includes data from active sites, as well as historical sites that have a period of record suitable for trend analysis. Sampling frequencies vary according to monitoring objectives. The number of sites in the network varies slightly from year-to-year, as sites are adjusted according to a risk-based adaptive management framework. The Great Lakes are sampled on a rotation basis and not all sites are sampled every year. Data are collected to meet federal commitments related to transboundary watersheds (rivers and lakes crossing international, inter-provincial and territorial borders) or under authorities such as the Department of the Environment Act, the Canada Water Act, the Canadian Environmental Protection Act, 1999, the Federal Sustainable Development Strategy, or to meet Canada's commitments under the 1969 Master Agreement on Apportionment.

The data contained in the dashboard describes the COVID-19 cases and deaths by province and health regions. The dashboard is developed by the Public Health Infobase in collaboration with the Health Portfolio Operation Center and the Public Health Geomatics Unit of the Public Health Agency of Canada. The data is provided by the COVID-19 Canada COVID Open Data Working Group (CCODWG) and by the Provinces and Territories through the Public Health Agency of Canada. This health region data is verified by the Public Health Agency of Canada in collaboration with Natural Resources Canada. The population data is provided by Statistics Canada. The chart on the cases and deaths are done the confirmed cases of COVID-19.

PURPOSE: As a part of a two-decade series of research, this study aims to provide a comprehensive synthesis of the effects of harvest and environmental change on fisheries in Great Bear Lake. The main objectives are to assess demographic traits and the current status of harvested species, with a focus on evaluating sustainable harvest levels of lake trout, a cold-adapted species with a relatively narrow thermal niche. As part of this research, trends in water quality and primary productivity are monitored to evaluate potential effects of change on fisheries. DESCRIPTION: Great Bear Lake, one of the largest lakes in North America, contains culturally and recreationally important fish species. Great Bear Lake is located in the sub-Arctic and Arctic Circle. As part of a two-decade series of research aimed to provide a comprehensive synthesis of the effects of harvest and environmental change on fisheries in Great Bear Lake, the main objectives of this study are to assess demographic traits and the current status of harvested species, with a focus on evaluating sustainable harvest levels of lake trout, a cold-adapted species with a relatively narrow thermal niche. As part of this research, trends in water quality and primary productivity are monitored to evaluate potential effects of change on fisheries. From 2012 to 2019, surface water temperature data was collected at depths of 0.1 to 1.0 meters using a Hydrolab Series 5 Data Sonde Multiparameter instrument through partnered community-led and community/Fisheries and Oceans Canada/university partners collaborative sampling. The project has strong community involvement, including youth through the Guardian Program, to facilitate capacity building and community leadership in the long-term monitoring of Great Bear Lake fisheries and the aquatic ecosystem. This data is an extension of baseline data sets on water quality on the lake. These data will contribute to a better understanding cumulative impacts of climate change on the functioning of large northern lake ecosystems and provide a benchmark for monitoring further change. This data will be important for developing effective strategies for maintaining community-led aquatic monitoring and managing natural resources, particularly fish, which are expected to be increasingly important to communities with declines in other country foods such as caribou. We acknowledge the data were collected in the Sahtú Settlement Area and are made publicly available with the agreement of the Délı̨nę Renewable Resources Council (Délı̨nę Ɂehdzo Got’ı̨nę (Renewable Resources Council)). Collaborators include: the Community of Délı̨nę partners (data collection), Délı̨nę Renewable Resource Council, University of Manitoba, University of Queens, University of British Columbia, University of Alberta, Environment and Climate Change Canada, and Great Lakes Fisheries Commission, Sahtú Renewable Resource Board. Community of Délı̨nę partners and field workers that participated in data collection include Daniel Baton, Morris Betsidea, Joey Dillion, Jade English, Stanley Ferdanan, Bruce Kenny, Elaine Kenny, Darren Kenny, Greg Kenny, Joseph Kenny, Rocky Kenny, Ted Mackienzo, George Menacho, Bobby Modeste, Gina Nyelle, Brent Taniton, Allison Tatti, Gerald Tutcho, Archie Vital, Barbara Yukon, Caroline Yukon, Chris Yukon, and Cyre Yukon. Funding and logistical support was provided by: Northwest Territories Cumulative Impact Monitoring, Natural Sciences and Engineering Research Council of Canada, Environment and Climate Change Canada, Sahtú Renewable Resource Board, the Polar Continental Shelf Program, and Fisheries and Oceans Canada.

Summary The Quebec region of the Department of Fisheries and Oceans (DFO) is responsible for the assessment of several fish and invertebrate stocks exploited in the Estuary and the northern Gulf of St. Lawrence. The commercial catches sampling program is one of the sources of information used to complete these assessments. The data collected by this program, at wharf or at sea, offers among other things the advantage of a relatively large spatio-temporal coverage and provides some of the necessary knowledge to assess the demography and the structure of the exploited populations. This program is implemented by specialized DFO staff whose main mandate is to collect biological data on groundfish, pelagic fish and marine invertebrate species that are commercially exploited in the various marine communities. Data This dataset on the green urchin (Strongylocentrotus droebachiensis) includes the metadata, sample weight, the test width and the number of specimens measured. This dataset covers the periods of 1995, 1997-1999 and 2003 to present. In order to protect the confidentiality of the sources, some informations (such as those concerning the vessel) have been excluded and others (such as the date of capture) have been simplified. Entries where there was only one vessel in a fishing area for a given year were also excluded. Further information including the fishing areas coordinates can be found by clicking on the «Atlantic and Arctic commercial fisheries» and «Fishing areas» links below.

Species characterization by environmental DNA (eDNA) is a method that allows the use of DNA released into the environment by organisms from various sources (secretions, faeces, gametes, tissues, etc.). It is a complementary tool to standard sampling methods for the identification of biodiversity. This project provides a list of fish and marine mammal species whose DNA has been detected in water samples collected between 2019 and 2021 using the mitochondrial marker MiFish (12S). The surveys were carried out in the summer of 2019 (July 14-18) and (July 30 - August 5), in the fall of 2020 (October 27-28) and in the summer-fall of 2021 (May 31 - June 3 ) and (August 24-25) between Forestville and Godbout (Haute-Côte-Nord). Sampling was carried out between 1-50 meters depth in 91 stations, with 1 to 3 replicates per station. Two liters of water were filtered through a 1.2 µm fiberglass filter. DNA extractions were performed with the DNeasy Blood and Tissues or PowerWater extraction kit (Qiagen). Negative field, extraction and PCR controls were added at the different stages of the protocol. The libraries were prepared either by Génome Québec (2019, 2020) or by the Genomics Laboratory of the Maurice-Lamontagne Institute (2021), then sequenced on a NovaSeq 4000 PE250 system by Génome Québec. The bioinformatics analysis of the sequences obtained was carried out using an analysis pipeline developed in the genomics laboratory. A first step made it possible to obtain a table of molecular operational taxonomic units (MOTU) using the cutadapt software for the removal of the adapters and the R package DADA2 for the filtration, the fusion, removal of chimeras and compilation of data. The MOTUs table was then corrected using the R package metabaR to eliminate the tag-jumping and take contaminants into consideration. Samples showing a strong presence of contaminating MOTUs were removed from the dataset. The MOTUs were also filtered to remove all remaining adapter sequences and also retain only those of the expected size (around 170 bp). Finally, taxonomic assignments were made on the MOTUs using the BLAST+ program and the NCBI-nt database. Taxonomic levels (species, genus or family) were assigned using a best match method (Top hit), with a threshold of 95%. Only assignments at the level of fish and marine mammals were considered, and the taxa detected were compared to a list of regional species, and corrected if necessary. The species detections of the different replicas have been combined. The file provided includes generic activity information, including site, station name, date, marker type, assignment types used for taxa identification, and a list of taxa or species. The list of taxa has been verified by a biodiversity expert from the Maurice-Lamontagne Institute. This project was funded by Fisheries and Oceans Canada's Coastal Environmental Baseline Data Program under the Oceans Protection Plan. This initiative aims to acquire baseline environmental data that contributes to the characterization of significant coastal areas and supports evidence-based assessments and management decisions to preserve marine ecosystems. Data were also published on SLGO platform : https://doi.org/10.26071/ogsl-2239bca5-c24a

A research survey on snow crab (Chionoecetes opilio) was conducted from July 1 to July 17, 2018 on the Lower North Shore of the Gulf of St. Lawrence between Havre-Saint-Pierre and Blanc-Sablon. The main objective of this survey was to assess the abundance of snow crab and benthic species associated with snow crab habitat. Only data for benthic species associated with snow crab habitat are presented in this dataset. Data were collected according to a fixed station sampling design consisting of 61 stations, between 46 and 230 meters depth. Specimens were collected using a beam trawl with a total width of 2.8 meters and a total height of 0.76 meters. The codend was lined with a 16 millimeter stretched mesh net in order to harvest the small individuals. The hauls were made at a target speed of 2 knots and a target duration of 10 minutes depending on seabed conditions. Start and end positions were recorded to calculate the distance traveled on each tow using the geosphere library in R. The average tow distance was approximately 25 m. The area covered at each tow was the product of the trawl opening and the distance traveled. The two files provided (DarwinCore format) are complementary and are linked by the "eventID" key. The "Activity_Information" file includes generic activity information, including date and location. The "occurrence_taxon" file includes the taxonomy of the species observed, identified to the species or lowest possible taxonomic level. To obtain the abundance and biomass assessment, contact Cedric Juillet (cedric.juillet@dfo-mpo.gc.ca). For quality controls, all taxonomic names were checked against the World Register of Marine Species (WoRMS) to match recognized standards. The WoRMS match was placed in the "ScientificIDname" field of the occurrence file. Special cases were noted in the "commentsIdentification" field and selected specimens were confirmed with field photos. Data quality checks were performed using the R obistools and Worms libraries. All sampling locations were spatially validated.