Bay Scale Assessment of Habitat in Bras d'Or Lake - River Denys 2005 - 2009 data is part of the publication Bay Scale Assessment of Nearshore Habitat Bras d'Or Lakes. A history of nearshore benthic surveys of Bras d’Or Lake from 2005 – 2011 is presented. Early work utilized drop camera and fixed mount sidescan. The next phase was one of towfish development, where camera and sidescan were placed on one platform with transponder-based positioning. From 2009 to 2011 the new towfish was used to ground truth an echosounder. The surveys were performed primarily in the northern half of the lake; from 10 m depth right into the shallows at less than 1 m. Different shorelines could be distinguished from others based upon the relative proportions of substrate types and macrophyte canopy. The vast majority of macrophytes occurred within the first 3 m of depth. This zone was dominated by a thin but consistent cover of eelgrass (Zostera marina L.) on almost all shores with a current or wave regime conducive to the growth of this plant. However, the eelgrass beds were frequently in poor shape and the negative impacts of commonly occurring water column turbidity, siltation, or possible localized eutrophication, are suspected. All survey data were placed into a Geographic Information System, and this document is a guide to that package. The Geographic Information System could be used to answer management questions such as the placement and character of habitat compensation projects, the selection of nearshore protected areas or as a baseline to determine long term changes. Vandermeulen, H. 2016. Video-sidescan and echosounder surveys of nearshore Bras d’Or Lake. Can. Tech. Rep. Fish. Aquat. Sci. 3183: viii + 39 p. Cite this data as: Vandermeulen H. Bay Scale Assessment of Nearshore Habitat Bras d'Or Lake - River Denys 2005 - 2009. Published May 2022. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S.

In 2018 and 2019 Fisheries and Oceans Canada conducted a project to relocate American Eel (Anguilla rostrata) from Port Dalhousie Harbour to mitigate potential impacts of in-water construction prior to and during an essential harbour revitalization project. American Eel are designated as Endangered under the Province of Ontario’s Endangered Species Act and were confirmed to be present in the area during initial sampling efforts of this project. While a combination of passive eel traps and boat electrofishing were used to capture eels, this dataset includes passive capture data only. A total of four eels were captured using eel traps and all individuals were relocated to Hamilton Harbour. Only two of the four eels captured were large enough to be tagged with acoustic transmitters, both of which eventually returned to Port Dalhousie from Hamilton Harbour. All other fish species captured in the traps were identified, counted and released at Port Dalhousie.

This record contains results from stable isotope analysis of sediment samples including δ 13C (‰), δ 15N (‰), total N and total C collected in the Beaufort Sea.

The 1 cm resolution vegetation digital height model was extracted using a bare earth model and digital surface model (DSM) derived from unmanned aerial vehicle (UAV) imagery acquired from a single day survey on July 28th 2016, in Cambridge Bay, Nunavut. The mapping product covers 525m2 and was produced by Canada Centre for Remote Sensing /Canada Centre for Mapping and Earth Observation. The UAV survey was completed in collaboration with the Canadian High Arctic Research Station (CHARS) for northern vegetation monitoring research. For more information, refer to our current Arctic vegetation research: Fraser et al; "UAV photogrammetry for mapping vegetation in the low-Arctic" Arctic Science, 2016, 2(3): 79-102. http://www.nrcresearchpress.com/doi/abs/10.1139/AS-2016-0008

The Canadian Weathership Program collected meteorological data at Station Papa (50N, 145W) in the North Pacific Ocean between 1949 and 1981. In 2014, researchers at the University of Washington (UW) Applied Physics Laboratory (APL) and the National Oceanic and Atmospheric Administration (NOAA) Pacific Marine Environmental Laboratory (PMEL) analyzed this historic data to determine its efficacy as a scientific tool. The data available here are the Government of Canada data files that were utilized for this analysis. The "OWSP Full Data (1949-1981)" file contains the entire Canadian Weathership Program record of data collected from Station Papa and the "OWSP Daily Averaged Wind Speed and Wave Height Data (1949-1981)" file contains daily averaged values of wind speed and wave height generated by the UW APL and NOAA PMEL researchers. The Data Dictionary for each data file contains notes on any quality controls that were applied to the data by the UW APL and NOAA PMEL researchers. The UW documents titled, "Data Documentation for Dataset 1170 (DSI-1170), Surface Marine Data, National Climatic Data Center" (https://digital.lib.washington.edu/researchworks/bitstream/handle/1773/25570/td1170.pdf?sequence=6&isAllowed=y) and "Table detailing units of data values in each file" (https://digital.lib.washington.edu/researchworks/handle/1773/25570), provide further information on the key values, point scales, and other units that were used in these datasets.

Bay-scale empirical demonstrations of how bivalve aquaculture alters plankton composition, and subsequently ecological functioning and higher trophic levels, are lacking. Temporal, inter- and within-bay variation in hydrodynamic, environmental, and aquaculture pressure limit efficient plankton monitoring design to detect bay-scale changes and inform aquaculture ecosystem interactions. Here, we used flow cytometry to investigate spatio-temporal variations in bacteria and phytoplankton (< 20 µm) composition in four bivalve aquaculture embayments. We observed higher abundances of bacteria and phytoplankton in shallow embayments that experienced greater freshwater and nutrient inputs. Depleted nutrient conditions may have led to the dominance of picophytoplankton cells, which showed strong within-bay variation as a function of riverine vs freshwater influence and nutrient availability. Although environmental forcings appeared to be a strong driver of spatio-temporal trends, results showed that bivalve aquaculture may reduce near-lease phytoplankton abundance and favor bacterial growth. We discuss aquaculture pathways of effects such as grazing, benthic-pelagic coupling processes, and microbial biogeochemical cycling. Conclusions provide guidance on optimal sampling considerations using flow cytometry in aquaculture sites based on embayment geomorphology and hydrodynamics. Cite this data as: Sharpe H, Lacoursière-Roussel A, Barrell J (2024). Monitoring bay-scale bivalve aquaculture ecosystem interactions using flow cytometry. Version 1.2. Fisheries and Oceans Canada. Samplingevent dataset. https://ipt.iobis.org/obiscanada/resource?r=monitoring_bay-scale_bivalve_aquaculture_ecosystem_interactions_using_flow_cytometry&v=1.2

Identification of ecological and biological significant areas (EBSA) in the Estuary and the Gulf of St. Lawrence according to six groups of the food chain : primary production (Lavoie et al, 2007), secondary production (Plourde et McQuinn, 2010), meroplankton (Ouellet, 2007), benthic invertebrates (Chabot et al, 2007), demersal fishes (Castonguay et Valois, 2007) and pelagic fishes (McQuinn et al, 2012). The distribution area of each group has been evaluated using five criteria in order to determine the EBSA (DFO, 2004): 1. Uniqueness: Ranked from areas whose characteristics are unique, rare, distinct, and for which alternatives do not exist to areas whose characteristics are widespread with many areas which are similar. 2. Aggregation: Ranked from areas where most individuals of a species are aggregated to areas where individuals of the species are widespread 3. Fitness consequence: Ranked from areas where the life history activity(ies) undertaken make a major contribution to the fitness of the population or species present to areas where the life history activity(ies) undertaken make only marginal contributions to fitness. 4. Resilience: Ranked from areas where the habitat structures or species are highly sensitive, easily perturbed, and slow to recover to areas where the habitat structures or species are robust, resistant to perturbation, or readily return to the pre-perturbation state. 5. Naturalness: Ranked from areas which are pristine and characterized by native species to areas which are highly perturbed by anthropogenic activities and/or with high abundances of introduced or cultured species. Castonguay, M. and Valois, S. 2007. Zones d’importance écologique et biologique pour les poissons démersaux dans le nord du Golfe du Saint-Laurent. DFO Can. Sci. Advis. Sec. Res. Doc. 2007/014. iii + 34 p. Chabot, D., Rondeau A., Sainte-Marie B., Savard L., Surette T. et Archambault P. 2007. Distribution des invertébrés benthiques dans l’estuaire et le golfe du Saint-Laurent. DFO Can. Sci. Advis. Sec. Res. Doc. 2007/018. iii + 118 p. DFO, 2004. Identification of Ecologically and Biologically Significant Areas. DFO Can. Sci. Advis. Sec. Ecosystem Status Rep. 2004/006. Lavoie, D., Starr, M., Zakardjian, B. and Larouche, P. 2007. Identification of ecologically and biologically significant areas (EBSA) in the Estuary and Gulf of St. Lawrence: Primary production. DFO Can. Sci. Advis. Sec. Res. Doc. 2007/079. iii + 29 p. McQuinn, I.H., Bourassa, M-N., Tournois, C., Grégoire, F., and Baril, D. 2012. Ecologically and biologically significant areas in the Estuary and Gulf of St. Lawrence: small pelagic fishes. DFO Can. Sci. Advis. Sec. Res. Doc. 2012/087. iii + 76 p. Ouellet P. 2007. Contribution à l’identification de zones d’importance écologique et biologique (ZIEB) pour l’estuaire et le golfe du Saint-Laurent : La couche des oeufs et des larves de poissons et de crustacés décapodes. DFO Can. Sci. Advis. Sec. Res. Doc. 2007/011. iii + 76 p. (Mise à jour novembre 2010) Plourde, S. et McQuinn, I.A. 2010. Zones d’importance écologique et biologique dans le golfe du Saint-Laurent : zooplancton et production secondaire. DFO Can. Sci. Advis. Sec. Res. Doc. 2009/104. iv + 27 p.

This data is intended to identify Canadian fresh waters which require additional measures (e.g., ballast water exchange and treatment) prior to release, as described in https://tc.canada.ca/en/marine-transportation/marine-safety/list-canada-s-designated-alternate-ballast-water-exchange-area-fresh-waters-tp-13617e-2021. The data is not intended for navigation purposes. According to Canada’s Ballast Water Regulations, vessels which are managing ballast water to meet the ballast water performance standard cannot release ballast water into fresh waters unless that ballast water was first exchanged in accordance with the ballast water exchange standard. For the purpose of this requirement, Canadian fresh waters are the following: - the waters at the Port of Kitimat and waters in or upstream of the Kitimat Arm, east of a line between Hilton Point and Steel Point; - the waters at the Port of Stewart and waters in or upstream of the Portland Canal, north of a line between Portland Point and Ramsden Point; - the waters of all Fraser River ports that are: -- east of Tilbury Island in the main arm of the Fraser River including Annacis Island and New Westminster docking areas; and -- east of the eastern tip of Mitchell Island in the north arm of Fraser River; - the waters of the Saguenay River ports and waters upstream of L’Anse-Creuse; - the waters of all St. Lawrence River ports and waters west of the east point of Ile d’Orléans including the port of Quebec City; - all Canadian waters of the Great Lakes Basin; and - the waters of Happy Valley-Goose Bay and waters of Lake Melville west of Rabbit Island. Legal Constraints: Users should be aware that the polygons depicting areas requiring additional measures to manage ballast water are intended for illustration only and should not be used for navigational or legal purposes.

The Beaufort Regional Environmental Assessment-Marine Fishes Project (2012-2014) and Canadian Beaufort Sea-Marine Ecosystem Assessment (CBS-MEA, 2017-present) conducted by Fisheries and Oceans Canada provide offshore surveys of marine fishes and ecosystems on the Canadian Beaufort Shelf and slope in August and early September. The projects focus on integrating oceanography, food web linkages, physical-biological couplings and spatial and inter-annual variability, within the context of ongoing climate-driven change including enhanced Ocean Acidification. Sampling was conducted from the F/V Frosti at stations along transects spanning 20-1000 m. Zooplankton was collected using a bongo or multi-net system in conjunction with oceanographic and biogeochemical sampling.

The AAFC Infrastructure Flood Mapping in Saskatchewan 1 meter Bare Earth DEM are the bare earth DEMs created at a 1 m interval for the capture area of Saskatchewan. The bare earth DEM elevations were derived from a TIN surface model of the combined DTM Key Point and Ground classes in the LiDAR point cloud tiles. It should be noted that the grid point elevations have been interpolated from the LiDAR points and may contain greater uncertainty depending on the amount of interpolation performed.