In 2019, the Earth Observation Team of the Science and Technology Branch (STB) at Agriculture and Agri-Food Canada (AAFC) repeated the process of generating annual crop inventory digital maps using satellite imagery to for all of Canada, in support of a national crop inventory. A Decision Tree (DT) based methodology was applied using optical (Landsat-8, Sentinel-2) and radar (RADARSAT-2) based satellite images, and having a final spatial resolution of 30m. In conjunction with satellite acquisitions, ground-truth information was provided by: provincial crop insurance companies in Alberta, Saskatchewan, Manitoba, & Quebec; point observations from the PEI Department of Environment, Water and Climate Change and data collection supported by our regional AAFC Research and Development Centres in St. John’s, Kentville, Charlottetown, Fredericton, and Guelph.

The greenland shark (Somniosus microcephalus), is a species found in Atlantic Canadian waters which is occasionally encountered in commercial fisheries. Pop-up Satellite Archival Tags (PSAT) from Wildlife Computers were applied to greenland sharks from 2006 to 2009 to collect data on depth (pressure), temperature and ambient light level (for position estimation). Deployments were conducted in Canada on commercial vessels throughout the year and in Cumberland Sound (Pangirtung) on a scientific expedition in April 2008. A variety of tag models were deployed: PAT 4 (n=1) and Mk10 (N=15) and 14 of 16 tags reported. Greenland sharks tagged ranged in size from 250 cm to 549 cm Total Length (curved); 3 were female, 9 were male, and 4 were of unknown sex. Time at liberty ranged from 48 – 350 days and 9 tags remained on the sharks for the programmed duration. Raw data transmitted from the PSAT’s after release was processed through Wildlife Computers software (GPE3) to get summary files, assuming a maximum swimming speed of 2m/s, NOAA OI SST V2 High Resolution data set for SST reference and ETOPO1-Bedrock dataset for bathymetry reference. The maximum likelihood position estimates are available in .csv and .kmz format and depth and temperature profiles are also in .csv format. Other tag outputs as well as metadata from the deployments can be obtained upon request from: warren.joyce@dfo-mpo.gc.ca or heather.bowlby@dfo-mpo.gc.ca.

Description: This dataset consists of three simulations from the Northeastern Pacific Canadian Ocean Ecosystem Model (NEP36-CanOE) which is a configuration of the Nucleus for European Modelling of the Ocean (NEMO) V3.6. The historical simulation is an estimate of the 1986-2005 mean climate. The future simulations project the 2046-2065 mean climate for representative concentration pathways (RCP) 4.5 (moderate mitigation scenario) and 8.5 (no mitigation scenario). Each simulation is forced by a climatology of atmospheric forcing fields calculated over these 20 year periods and the winds are augmented with high frequency variability, which introduces a small amount of interannual variability. Model outputs are averaged over 3 successive years of simulation (the last 3, following an equilibration period); standard deviation among the 3 years is available upon request. For each simulation, the dataset includes the air-sea carbon dioxide flux, monthly 3D fields for potential temperature, salinity, potential density, total alkalinity, dissolved inorganic carbon, nitrate, oxygen, pH, total chlorophyll, aragonite saturation state, total primary production, and monthly maximum and minimum values for oxygen, pH, and potential temperature. The data includes 50 vertical levels at a 1/36 degree spatial resolution and a mask is provided that indicates regions where these data should be used cautiously or not at all. For a more detailed description please refer to Holdsworth et al. 2021. The data available here are the outputs of NEP36-CanOE_RCP 4.5; a projection of the 2046-2065 climate for the moderate mitigation scenario RCP 4.5. Methods: This study uses a multi-stage downscaling approach to dynamically downscale global climate projections at a 1/36° (1.5 − 2.25 km) resolution. We chose to use the second-generation Canadian Earth System model (CanESM2) because high-resolution downscaled projections of the atmosphere over the region of interest are available from the Canadian Regional Climate Model version 4 (CanRCM4). We used anomalies from CanESM2 with a resolution of about 1° at the open boundaries, and the regional atmospheric model, CanRCM4 (Scinocca et al., 2016) for the surface boundary conditions. CanRCM4 is an atmosphere only model with a 0.22° resolution and was used to downscale climate projections from CanESM2 over North America and its adjacent oceans. The model used is computationally expensive. This is due to the relatively high number of points in the domain (715 × 1,021 × 50) and the relatively complex biogeochemical model (19 tracers). Therefore, rather than carrying out interannual simulations for the historical and future periods, we implemented a new method that uses atmospheric climatologies with augmented winds to force the ocean. We show that augmenting the winds with hourly anomalies allows for a more realistic representation of the surface freshwater distribution than using the climatologies alone. Section 2.1 describes the ocean model that is used to estimate the historical climate and project the ocean state under future climate scenarios. The time periods are somewhat arbitrary; 1986–2005 was chosen because the Coupled Model Intercomparison Project Phase 5 (CMIP5) historical simulations end in 2005 as no community-accepted estimates of emissions were available beyond that date (Taylor et al., 2009); 2046–2065 was chosen to be far enough in the future that changes in 20 year mean fields are unambiguously due to changing GHG forcing (as opposed to model internal variability) (e.g., Christian, 2014), but near enough to be considered relevant for management purposes. While it is true that 30 years rather than 20 is the canonical value for averaging over natural variability, in practice the difference between a 20 and a 30 year mean is small (e.g., if we average successive periods of an unforced control run, the variance among 20 year means will be only slightly larger than for 30 year means). Also, there is concern that longer averaging periods are inappropriate in a non-stationary climate (Livezey et al., 2007; Arguez and Vose, 2011). We chose 20 year periods because they are adequate to give a mean annual cycle with little influence from natural variability, while minimizing aliasing of the secular trend into the means. As the midpoints of the two time periods are separated by 60 years, the contribution of natural variability to the differences between the historical and future simulations is negligible e.g., (Hawkins and Sutton, 2009; Frölicher et al., 2016). Section 2.2 describes how climatologies derived from observations were used for the initialization and open boundary conditions for the historical simulations and pseudo-climatologies were used for the future scenarios. The limited availability of observations means that the years used for these climatologies differs somewhat from the historical and future periods. Section 2.3 details the atmospheric forcing fields and the method that we developed to generate winds with realistic high-frequency variability while preserving the daily climatological means from the CanRCM4 data. Section 2.4 shows the equilibration of key modeled variables to the forcing conditions Data Sources: Model output Uncertainties: These climate projections are downscaled from a single global climate model (CanESM2/CanRCM4) because the cost of ensembles is presently prohibitive. Our experimental design uses climatological forcing for each time period so the differences between them are almost entirely due to anthropogenic forcing with little effect of natural variability.

Description: This dataset consists of three simulations from the Northeastern Pacific Canadian Ocean Ecosystem Model (NEP36-CanOE) which is a configuration of the Nucleus for European Modelling of the Ocean (NEMO) V3.6. The historical simulation is an estimate of the 1986-2005 mean climate. The future simulations project the 2046-2065 mean climate for representative concentration pathways (RCP) 4.5 (moderate mitigation scenario) and 8.5 (no mitigation scenario). Each simulation is forced by a climatology of atmospheric forcing fields calculated over these 20 year periods and the winds are augmented with high frequency variability, which introduces a small amount of interannual variability. Model outputs are averaged over 3 successive years of simulation (the last 3, following an equilibration period); standard deviation among the 3 years is available upon request. For each simulation, the dataset includes the air-sea carbon dioxide flux, monthly 3D fields for potential temperature, salinity, potential density, total alkalinity, dissolved inorganic carbon, nitrate, oxygen, pH, total chlorophyll, aragonite saturation state, total primary production, and monthly maximum and minimum values for oxygen, pH, and potential temperature. The data includes 50 vertical levels at a 1/36 degree spatial resolution and a mask is provided that indicates regions where these data should be used cautiously or not at all. For a more detailed description please refer to Holdsworth et al. 2021. Methods: This study uses a multi-stage downscaling approach to dynamically downscale global climate projections at a 1/36° (1.5 − 2.25 km) resolution. We chose to use the second-generation Canadian Earth System model (CanESM2) because high-resolution downscaled projections of the atmosphere over the region of interest are available from the Canadian Regional Climate Model version 4 (CanRCM4). We used anomalies from CanESM2 with a resolution of about 1° at the open boundaries, and the regional atmospheric model, CanRCM4 (Scinocca et al., 2016) for the surface boundary conditions. CanRCM4 is an atmosphere only model with a 0.22° resolution and was used to downscale climate projections from CanESM2 over North America and its adjacent oceans. The model used is computationally expensive. This is due to the relatively high number of points in the domain (715 × 1,021 × 50) and the relatively complex biogeochemical model (19 tracers). Therefore, rather than carrying out interannual simulations for the historical and future periods, we implemented a new method that uses atmospheric climatologies with augmented winds to force the ocean. We show that augmenting the winds with hourly anomalies allows for a more realistic representation of the surface freshwater distribution than using the climatologies alone. Section 2.1 describes the ocean model that is used to estimate the historical climate and project the ocean state under future climate scenarios. The time periods are somewhat arbitrary; 1986–2005 was chosen because the Coupled Model Intercomparison Project Phase 5 (CMIP5) historical simulations end in 2005 as no community-accepted estimates of emissions were available beyond that date (Taylor et al., 2009); 2046–2065 was chosen to be far enough in the future that changes in 20 year mean fields are unambiguously due to changing GHG forcing (as opposed to model internal variability) (e.g., Christian, 2014), but near enough to be considered relevant for management purposes. While it is true that 30 years rather than 20 is the canonical value for averaging over natural variability, in practice the difference between a 20 and a 30 year mean is small (e.g., if we average successive periods of an unforced control run, the variance among 20 year means will be only slightly larger than for 30 year means). Also, there is concern that longer averaging periods are inappropriate in a non-stationary climate (Livezey et al., 2007; Arguez and Vose, 2011). We chose 20 year periods because they are adequate to give a mean annual cycle with little influence from natural variability, while minimizing aliasing of the secular trend into the means. As the midpoints of the two time periods are separated by 60 years, the contribution of natural variability to the differences between the historical and future simulations is negligible e.g., (Hawkins and Sutton, 2009; Frölicher et al., 2016). Section 2.2 describes how climatologies derived from observations were used for the initialization and open boundary conditions for the historical simulations and pseudo-climatologies were used for the future scenarios. The limited availability of observations means that the years used for these climatologies differs somewhat from the historical and future periods. Section 2.3 details the atmospheric forcing fields and the method that we developed to generate winds with realistic high-frequency variability while preserving the daily climatological means from the CanRCM4 data. Section 2.4 shows the equilibration of key modeled variables to the forcing conditions Data Sources: Model output Uncertainties: The historical climatologies were evaluated using observational climatologies generated from stations with a long time series of data over the time period including CTDs, nutrient profiles, lighthouse and satellite SST, and buoy data. The model is able to represent the historical conditions with an acceptable bias. The resolution of this model is insufficient to represent the narrow straits and channels of this region so the dataset includes a cautionary mask to exclude these regions.

LiDAR data was collected using LSI's proprietary Helix LiDAR system - Novatel GPS and SPANS inertial unit, coupled to a Riegl Q560 digital waveform ranging laser and mounted in a Cessna 185 aircraft. LiDAR was collected at 600m AGL, and a ground speed of 160km/h. Original data was in an ASCII XYZ coordinate format.

Spiny dogfish (Squlaus acanthias), is a species found in Atlantic Canadian waters which is encountered mostly in commercial fisheries. Pop-up Satellite Archival Tags (PSAT) from Wildlife Computers were applied to spiny dogfish from 2008 to 2009 to collect data on depth (pressure), temperature and ambient light level (for position estimation). Deployments were conducted in Canada on commercial fishing vessels from August to October. Wildlife Computers PSAT Mk10 (N=6) were used and 3 of 6 tags reported. One tag was found washed up on shore and was returned. The spiny dogfish tagged ranged in size from 80 cm to 96 cm Fork Length (curved); all 6 were female. Time at liberty ranged from 75 – 234 days and the 43 tags that reported remained on the sharks for the programmed duration. Raw data transmitted from the PSAT’s after release was processed through Wildlife Computers software (GPE3) to get summary files, assuming a maximum swimming speed of 2m/s, NOAA OI SST V2 High Resolution data set for SST reference and ETOPO1-Bedrock dataset for bathymetry reference. The maximum likelihood position estimates are available in .csv and .kmz format and depth and temperature profiles are also in .csv format. Other tag outputs as well as metadata from the deployments can be obtained upon request from: warren.joyce@dfo-mpo.gc.ca or heather.bowlby@dfo-mpo.gc.ca.

The National Ecological Framework for Canada's "Land and Water Area by Province/Territory and Ecodistrict” dataset provides land and water area values by province or territory for the Ecodistrict framework polygon, in hectares. It includes codes and their English and French descriptions for a polygon’s province or territory, total area, land-only area and large water body area.

Krill is a generic name for crustaceans of the order Euphausiids, most of which are known to be Thysanoessa raschii and Meganyctiphanes norvegica in eastern Canada. Krill is an important food resource for many marine mammals, in particular the blue whale. The maps show the points of high krill concentration per month from April to November. Each point gives the number of years of high aggregation probability (6 to 10 years). The data were produced from a mathematical model developed in Plourde et al. 2016. The model has allowed to calculate the probability of meeting a strong aggregation of krill over a period of 10 years. High krill aggregations are defined as the 95th percentile of predicted biomass in 10 x 10 km cells covering the Estuary and Gulf of St. Lawrence. Additional Information Plourde, S., Lehoux, C., McQuinn, I.H., and Lesage, V. (2016). Describing krill distribution in the western North Atlantic using statistical habitat models. DFO Can. Sci. Advis. Sec. Res. Doc. 2016/nnn. vi + xx p. Plourde, S., McQuinn, I.H., Lesage, V., Lehoux, C., Joly, P., Bourassa, M-N. in prep. Spatial distribution of krill in eastern Canadian waters: a climatological approach based on historical plankton net and acoustic data. The data are incomplete upstream of Pointe-des-Monts because of the lack of water height anomalies in the area (variable being used to predict aggregations of krill). A less number of years with a high aggregation of krill is thus represented but that should not be interpreted as a less favorable zone compared to areas East of Pointe-des-Monts.

The National Ecological Framework for Canada's "Land Cover by Ecoprovince” dataset provides land cover information within the ecoprovince framework polygon. It provides landcover codes and their English and French language description as well as information about the percentage of the polygon that the component occupies.

A novel, bay – scale (i.e. tens of km) survey method was employed to examine algal populations on the southwestern shore of Cape Breton, Canada, for the purposes of potential economic exploitation. Since traditional remote sensing methods were unlikely to be successful in these waters, underwater video and acoustic methods were applied. A transponder positioned towfish housing video camera and sidescan sonar was hauled along predetermined transects perpendicular to shore to provide information on bottom type and algal cover. The towfish data were used to ground truth echosounder data (bottom type and macrophyte canopy height) collected along 5, 10 and 20 m depth contours. The survey area was divided into six zones comprising a range of exposure, depth and bottom types. Destructive quadrat samples were collected at each depth plus shore stations to provide biomass estimates. Over thirty five taxa were enumerated, indicating depths and zones of common occurrence. Ascophyllum was abundant at some of the shore stations. The genera Chondrus, Cystoclonium, Desmarestia, Fucus, Phyllophora, Polysiphonia, and Saccharina were common at 5 m. Desmarestia and Saccharina dominated at 10 m with wet weights sometimes over 1 kg·m-2. Agarum dominated at 20 m. The towfish / echosounder grid sampling system was relatively coarse in order to cover the 140 km2 survey area within 12 days. As a result, the survey did not produce spatially detailed information. However, adequate information was gathered to describe the general characteristics of bottom type and algal cover by zone and for focusing further exploration--Abstract, p. vi. Cite this data as: Vandermeulen H. Data of: A Novel Video and Acoustic Survey of the Seaweeds of Isle Madame. Published: August 2021. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S. https://open.canada.ca/data/en/dataset/ebdd8f91-9131-45f0-8aec-aba9f65e3fae