Fisheries and Oceans Canada (DFO) conducts an annual summer multidisciplinary scientific survey with a bottom trawl in the Estuary and the northern Gulf of St. Lawrence since 1984. Over the years this survey has been conducted on four vessels: the MV Lady Hammond (1984-1990), the CCGS Alfred Needler (1990-2005), the CCGS Teleost (2004-2022) and the CCGS Cabot (2022-current). It is important to note that the objectives, the methods used and the identification of the species during these surveys have improved over time in response to DFO requests and mandates. The data are therefore not directly comparable between these surveys. However, comparative analyses have been carried out between vessels, and conversion factors are available upon request for a number of species. The specificities of the missions onboard the CCGS Cabot are described below. Objectives: 1. Assess groundfish and northern shrimp population abundance and condition 2. Assess environmental conditions 3. Conduct a biodiversity inventory of benthic and demersal megafauna 4. Assess phytoplankton and mesozooplankton abundance 5. Monitor the pelagic ecosystem 6. Collect samples for various research projects Survey description The survey covers the Estuary and the northern Gulf of St. Lawrence, that is the divisions 4R, 4S and the northern part of division 4T of the Northwest Atlantic Fisheries Organization (NAFO). Since 2008, coverage of division 4T has been increased in the upstream part of the Lower Estuary. Approximately 200 sampling stations are randomly attributed in depth-based strata, ranging from around 40 m near the shores to close to 500 m in the deep channels. The fishing gear used on the CCGS Cabot is a four-sided modified Campelen 1800 shrimp trawl equipped with a Rockhopper footgear (“bicycle”). The trawl lengthening and codend are equipped with a 12.7-mm knotless nylon lining. Standard trawling tows last 15 minutes, starting from the time the trawl touches the sea floor. The aimed towing speed is 3 knots. Data For each fishing tow, the catch is sorted and weighed by taxa; individuals are then counted and biological data are collected on a subsample. For fish, crab and squid, size and weight are measured by individual and, for some species, sex, gonad maturity, and the weight of certain organs (stomach, liver, gonads) are also evaluated. The soft rays of the anal fin are counted for redfish, and the otoliths are sampled for several species such as Atlantic cod, Atlantic halibut, Greenland halibut and witch flounder. A roughly 2-kg shrimp sample is sorted and weighed by species (and by stage of maturity for northern shrimp). The shrimps are measured individually. The other invertebrates are counted (no individual measurements) and photographed. The biological data are divided into 4 files: a “Metadata” file containing set information, a “Catches” file containing catches per set for fish taxa, a “Carbio” file containing biological and morphometric measurements per individual and a “Shrimps” file containing information on shrimp catches. The latest published data is preliminary and will be updated at the end of January of the following year. It's important to note that this is raw data. Only sets considered successful are retained. In each set, all species are kept, with a few exceptions. For more information please contact the data management team (gddaiss-dmsaisb@dfo-mpo.gc.ca).

This dataset contains average concentrations of water chemistry collected from stream catchments C31, C32, C33, C34, C35, C37, C38, C39, C42, C46, C47, C49, and C50 in the Turkey Lakes Watershed, approximately 60 km northwest of Sault Ste. Marie, Ontario, Canada. These are average concentrations recorded from 1981-2018 in milligrams per litre (mg/L) of major ions (Ca, Mg, K, Na, SO4, Cl, NO3-N, NH4-N) and some nutrients (TP, TN) collected by the Great Lakes Forestry Centre. Samples are collected according to variable schedules such that frequency generally increased with increasing stream flow, (sampling period was shortest during spring runoff, 1-3 days, and longest during winter, 2-3 weeks). Sampling was accomplished by rinsing an appropriately cleaned 2-litre, polyethylene bottle at least 3 times with stream water followed by immersion to collect the final sample. Care was taken to not disturb the stream sediments throughout the sampling procedure. pH and conductivity testing is completed right after sampling. Other chemical analyses are completed by the Great Lakes Forestry Centre in Sault Ste. Marie within 2 weeks of collection. Sample integrity was maintained through storage in the dark at 4 degrees Celsius and analyzed at room temperature.

A research survey on snow crab (Chionoecetes opilio) was conducted from July 7 to July 26, 2019 in the Estuary St. Lawrence River between Forestville, Baie-Comeau and Matane. The main objective of this survey was to assess the abundance of snow crab and benthic species associated with snow crab habitat. Only data for benthic species associated with snow crab habitat are presented in this dataset. Data were collected according to a fixed station sampling design consisting of 66 stations, between 31 and 279 meters depth. Specimens were collected using a beam trawl with a total width of 2.8 meters and a total height of 0.76 meters. The codend was lined with a 16 millimeter stretched mesh net in order to harvest the small individuals. The hauls were made at a target speed of 2 knots and a target duration of 15 minutes. Start and end positions were recorded to calculate the distance traveled on each tow using the geosphere library in R. The average tow distance was approximately 25 m. The area covered at each tow was the product of the trawl opening and the distance traveled. The two files provided (DarwinCore format) are complementary and are linked by the "eventID" key. The "Activity_Information" file includes generic activity information, including date and location. The "occurrence_taxon" file includes the taxonomy of the species observed, identified to the species or lowest possible taxonomic level. To obtain the abundance and biomass assessment, contact Cedric Juillet (cedric.juillet@dfo-mpo.gc.ca). For quality controls, all taxonomic names were checked against the World Register of Marine Species (WoRMS) to match recognized standards. The WoRMS match was placed in the "ScientificnameID" field of the occurrence file. Data quality checks were performed using the R obistools and worrms libraries. All sampling locations were spatially validated.

Summary The Quebec region of the Department of Fisheries and Oceans (DFO) is responsible for the assessment of several fish and invertebrate stocks exploited in the Estuary and the northern Gulf of St. Lawrence. The commercial catches sampling program is one of the sources of information used to complete these assessments. The data collected by this program, at wharf or at sea, offers among other things the advantage of a relatively large spatio-temporal coverage and provides some of the necessary knowledge to assess the demography and the structure of the exploited populations. This program is implemented by specialized DFO staff whose main mandate is to collect biological data on groundfish, pelagic fish and marine invertebrate species that are commercially exploited in the various marine communities. Data This dataset on the American lobster (Homarus americanus) includes the metadata, sample weight, cephalothorax length, sex and the number of specimens measured. This dataset covers the periods of 1998 and 2000 to present. In order to protect the confidentiality of the sources, some informations (such as those concerning the vessel) have been excluded and others (such as the date of capture) have been simplified. Entries where there was only one vessel in a fishing area for a given year were also excluded. Further information including the fishing areas coordinates can be found by clicking on the «Atlantic and Arctic commercial fisheries» and «Fishing areas» links below.

The objective of this project was to gather data to develop a model of the food web of the lower trophic levels of the nearshore area of the Beaufort Sea. Sampling took place from 2005 to 2008 using the CCGS Nahidik. The multidisciplinary character of the Nahidik program produced measurements of biology/ecology (primary production, phytoplankton, zooplankton, benthos, fish), chemical and physical oceanography, contaminants, geology and hydro acoustics. The data were collected in July and August of each year. The Nahidik program provided data to provide a baseline for future studies as well as an information source for environmental assessment. This record contains water chemistry data collected as part of this project including suspended nitrogen, dissolved nitrogen, suspended phosphorus, dissolved phosphorus, dissolved organic carbon, suspended carbon, chlorophyll a, and suspended silicon.

Fisheries and Oceans Canada and Environment and Climate Change Canada (Northern Contaminants program) have been working with Nunavut community Hunters and Trappers Organizations and the Nunavut Wildlife Management Board consistently since 1980 to collect samples from harvested ringed seals. The majority of seals were measured in the field by Inuit hunters who recorded date of kill, sex and blubber depth at sternum (0.5 cm). The data from the harvested animals are used to evaluate stressors and overall seal health, in the Canadian Arctic.

This resource documents a dataset of epifauna occurrences collected in 2021 during The Knowledge and Ecosystem-Based Approach in Baffin Bay (KEBABB) program developed by the Department of Fisheries and Oceans Canada (DFO) in collaboration with university partners. The overall objective of KEBABB is to characterize the variability and trends in physical, chemical, and biological oceanographic conditions and food webs supporting fisheries in the connected ecosystems of western Baffin Bay and Lancaster Sound. In 2021, DFO expanded the KEBABB program to Barrow Strait (KEBABS-Knowledge and Ecosystem-Based Approach in Barrow Strait), a key productive area of the Tallurutiup Imanga National Marine Conservation Area. The study took place in the Eastern Canadian Arctic (mainly in Baffin Bay, Davis Strait and Barrow Strait). Sampling is done along transects at fixed stations in the study area. Catches are collected with a 1.5 m Agassiz trawl (5 mm mesh net) for 3 minutes bottom-contact time at a target speed of 1.5 knots and with a 3 m benthic beam trawl (6.4 mm mesh net) for 15 minutes bottom-contact time at a target speed of 3 knots. A total of 16 stations were sampled for epifauna in 2021 between 85-850 m depth. Epibenthic invertebrates are identified to the lowest possible taxonomic level and photographed. All unknown specimens are frozen. In the lab, the identifications are validated or refined with the photos and the frozen specimens. The data are presented in Darwin Core and are separated in two files: The “Activité_épifaune_KEBABB_epifauna_event_en” file which contains information about missions, stations and deployments, which are presented under a hierarchical activity structure. The “Occurrence_épifaune_KEBABB_epifauna_en” file that contains the taxonomic occurrences. Further details on sampling can be found in the following report: Pućko, M., Charette, J., Tremblay P., Brulotte S., St-Denis B., Ciastek S., Hedges, K., Kuzyk, Z., Roy V., and Michel, C. 2022. An ecosystem-based approach in the eastern Arctic: KEBABB/S (Knowledge and Ecosystem-Based Approach in Baffin Bay/Barrow Strait) 2021 expedition report. Can. Manuscr. Rep. Fish. Aquat. Sci. 3250: viii + 58 p. https://publications.gc.ca/collections/collection_2022/mpo-dfo/Fs97-4-3250-eng.pdf USE LIMITATION: To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.

PURPOSE: The objective of the sea scallop survey is to obtain fishery independent data on the abundance, size distribution and location of scallops in the southern Gulf of St. Lawrence and to provide science advice on stock status to fishery managers, decision makers and industry stakeholders. DESCRIPTION: The sea scallop research survey is conducted on CCGS MPerley (or chartered vessels) and has stratified random sampling. For each tow (or sample), data is recorded on tow, all specimens caught, geolocation, shell height frequency and biological samples. This monitoring program is currently on-hold. It will resume if a survey is deemed necessary to provide a new or updated science advice in the future. Stock status is currently (2024) in the critical zone. Rebuilding plan to follow. PARAMETERS COLLECTED: Catch number (biological), catch weight (biological), individual lengths (biological), age (biological), meat weight (biological). PHYSICAL SAMPLE DETAILS: A sub-sample of scallop shells is retained and analysed for age determination in the lab. SAMPLING METHODS: From 2012 to 2016, an annual, rotational, multispecies research survey program for scallop in the sGSL was conducted to obtain fishery independent indices of abundance, biomass estimates, and biological characteristics information (shell height, meat weight, sex, clappers). One section of a SFA or the SFA in its entirety was surveyed per year, with the exception of SFA 23 which was excluded because of the low scallop fishing effort reported from this area in recent years. From 2019 to 2023, annual surveys were conducted on the three major beds in the Northumberland Strait (West Point and Cape Tormentine in SFA 22, Pictou in SFA 24), using a similar methodology as the previous surveys. Methodology can be found in the Science Advisory Report and the Research Document listed in the citations list. USE LIMITATION: To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.

Long-term freshwater quality data from federal and federal-provincial sampling sites throughout Canada's aquatic ecosystems are included in this dataset. Measurements regularly include physical-chemical parameters such as temperature, pH, alkalinity, major ions, nutrients and metals. Collection includes data from active sites, as well as historical sites that have a period of record suitable for trend analysis. Sampling frequencies vary according to monitoring objectives. The number of sites in the network varies slightly from year-to-year, as sites are adjusted according to a risk-based adaptive management framework. The Great Lakes are sampled on a rotation basis and not all sites are sampled every year. Data are collected to meet federal commitments related to transboundary watersheds (rivers and lakes crossing international, inter-provincial and territorial borders) or under authorities such as the Department of the Environment Act, the Canada Water Act, the Canadian Environmental Protection Act, 1999, the Federal Sustainable Development Strategy, or to meet Canada's commitments under the 1969 Master Agreement on Apportionment.

PURPOSE: The primary objective of this survey is to obtain an index of the abundance of American lobster (Homarus Americanus) in the Northumberland Strait. This research survey also provides fisheries-independent information for all of the species captured by the trawl. DESCRIPTION: Catch weight, length frequencies, and biological information for crustaceans and fish caught during the annual July-August research vessel trawl survey in Northumberland Strait (NAFO Division 4T). Abundance indices and spatial distribution patterns of commercial and non-commercial crustaceans and other groundfish. PARAMETERS COLLECTED: The full catch is sorted to species, or lowest taxonomic group possible, and weighed. For lobster, carapace length, sex and carapace condition (i.e. stage of moult) are recorded. For female lobster, the presence or absence of eggs is noted and, starting in 2010, the stage of development of the eggs (i.e. new or old) when present was also recorded. Similarly, for crabs, the carapace width, sex and carapace condition (i.e. stage of moult) is recorded as is the presence or absence of eggs (for females). Fish sampling varied over the years but, starting in 2005, length has been recorded for all fish captured. For large catches, the complete catch is sorted and weighed, but sub-sampling, by species, is used for the other measurements. NOTES ON QUALITY CONTROL: Data are checked for irregularities. SAMPLING METHODS: The Northumberland Strait multi-species survey began in 2001 as a random stratified survey and now employs a random selection of sampling sites within the study area. Sampling is completed annually over a 4-week period in July and August. 110 stations are sampled in Northumberland Strait in water depths exceeding 4 m at Lowest Normal Tide. The survey has employed a 286 rockhopper trawl in all years from 2001 to 2018, except in 2010 and 2011 when a Nephrops trawl was used. In 2019, a newly designed trawl (termed the “Northumberland trawl”) was used in addition to the rockhopper trawl. The Northumberland trawl is similar to the rockhopper trawl but with a smaller footgear and smaller mesh sizes. At each station, the trawl is towed for a set period of time (recently 15 minutes with the rockhopper trawl and 10 minutes with the Northumberland trawl). USE LIMITATION: To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.