Summary The Quebec region of the Department of Fisheries and Oceans (DFO) is responsible for the assessment of several fish and invertebrate stocks exploited in the Estuary and the northern Gulf of St. Lawrence. The commercial catches sampling program is one of the sources of information used to complete these assessments. The data collected by this program, at wharf or at sea, offers among other things the advantage of a relatively large spatio-temporal coverage and provides some of the necessary knowledge to assess the demography and the structure of the exploited populations. This program is implemented by specialized DFO staff whose main mandate is to collect biological data on groundfish, pelagic fish and marine invertebrate species that are commercially exploited in the various marine communities. Data This dataset on the American plaice (Hippoglossoides platessoides) includes the metadata, sample weight, fish length, the sex and the number of specimen measured. This dataset covers the periods of 1989-2002, 2006-2008 and 2016-2018. In order to protect the confidentiality of the sources, some informations (such as those concerning the vessel) have been excluded and others (such as the date of capture) have been simplified. Entries where there was only one vessel in a fishing area for a given year were also excluded. Further information including the fishing areas coordinates can be found by clicking on the «Atlantic and Arctic commercial fisheries» and «Fishing areas» links below.

Cold-water corals are conspicuous in the waters off Eastern Canada. Despite that, there are few DNA sequence records from specimens collected in the region available in GenBank, and not all species recorded in the region have sequence data regardless of geographic origin. This can limit the use of eDNA techniques to detect and identify corals. Our objective was to sequence and publish sequences for two octocoral DNA barcoding markers: CO1 and MutS. We sequenced and deposited 36 sequences to GenBank from 19 specimens representing three sea pen taxa (Octocorallia: Pennatuloidea): Distichoptilum gracile, Pennatula aculeata, and Protoptilum carpenteri. Identification of all specimens was confirmed by B. M. Neves before submission. Specimens and DNA tissues were donated to the Canadian Museum of Nature, where they are currently stored. This publication is part 1 of a series of GenBank submissions by our lab. Specimens were collected from across the Northwest Atlantic and originate from depths ranging between 200-1924 meters. Specimens were collected as part of research vessel multispecies trawl surveys or remotely operated vehicle (ROV ROPOS) surveys. DNA was isolated and purified using the QIAgen DNeasy Blood and Tissue kit, with an initial overnight incubation with Proteinase K. Two commonly used octocoral barcoding regions were amplified using previously described primers: 1) COII8068F (McFadden et al., 2004) and COIOCTR (France and Hoover, 2002) for the CO1 gene, and 2) ND42599F (France and Hoover, 2002) and mut3458R (Sánchez et al., 2003) for the MutS gene. Amplifications were conducted using 12.5 µl of Green DreamTaq Master Mix (Thermo Fisher Scientific), 1 µl of template DNA, 0.5 µl of each 10 µM forward and reverse primers, 0.5 µl of 10 µM reverse primer, and 10.5 µl of water. Thermocycling was run as follows: 3 min of initial denaturation at 95 °C, followed by 40 cycles at 95 °C for 30 s, 30 s at annealing temperature of 48 °C, then 65 s at an extension temperature of 72 °C, and a final elongation at 72 °C for 4 min. PCR products were cleaned using Agencourt AMPure XP Beads (Beckman Coulter) and sent to The Center for Advanced Genomics, Toronto, Canada for Sanger sequencing. Sequences were visualized and aligned using Geneious Prime 2022.0.2. Obtained sequences have been deposited in GenBank under accession numbers OQ569768- OQ569784 and OQ420359- OQ420377. This work was funded by Fisheries and Oceans Canada under an Enhanced Regional Capacity grant (2020-2021) and the Marine Conservation Targets (MCT) program (2021-2024), Newfoundland and Labrador Region.

The Canadian Environmental Sustainability Indicators (CESI) program provides data and information to track Canada's performance on key environmental sustainability issues. The Greenhouse gas emissions from large facilities indicator reports total greenhouse gas emissions from the largest greenhouse gas emitters in Canada for the 2023 reporting year. The Greenhouse Gas Reporting Program ensures that the greenhouse gas emissions from Canada's largest emitters are tracked and reported. This mandatory reporting contributes to the development, implementation and evaluation of climate change and energy policies and strategies in Canada. Greenhouse gas emissions data reported through the Greenhouse Gas Reporting Program are used to inform the development of estimates of greenhouse gas emissions in Canada in the National Inventory Report, and to support regulatory initiatives. Information is provided to Canadians in a number of formats including: static and interactive maps, charts and graphs, HTML and CSV data tables and downloadable reports. See the supplementary documentation for the data sources and details on how the data were collected and how the indicator was calculated. Canadian Environmental Sustainability Indicators: https://www.canada.ca/environmental-indicators

With the changing climate conditions, marine traffic along Canada’s coastal regions has increased over the past couple of decades and the need to improve our state of preparedness for oil-spill-related emergencies is critical. Baseline coastal information, such as shoreline form, substrate, and vegetation type, is required for prioritizing operations, coordinating onsite spill response activities (i.e. Shoreline Cleanup Assessment Technique [SCAT]), and providing information for wildlife and ecosystem management. Between 2010 and 2016, georeferenced high-definition videography and photos were collected for various study sites along the north coast of Canada. The study areas include Beaufort Sea, Mackenzie Delta channels and Banks Island in the western Canadian Arctic and James Bay, Hudson Bay, Nunavik, Resolute Bay, Victoria Strait, Baffin Island and Coronation Gulf in the eastern Canadian Arctic. Data was collected during ice-free and low tide conditions (where applicable) between July and September. Low-altitude helicopter surveys were conducted at each study site to capture video of the shoreline characteristics. In addition to acquiring videography, ground-based observations were recorded in several locations for validation. Shoreline segmentation was then carried out by manual interpretation of the oblique videography and the photos aided by ancillary data. This involved splitting and classifying the shoreline vectors based on homogeneity of the upper intertidal zone. Detailed geomorphological information (i.e. shoreline type, substrate, slope, height, accessibility etc.) describing the upper intertidal, lower intertidal, supratidal and backshore zones was extracted from the video and entered into a geospatial database using a customized data collection form. In addition, biological characteristics like biobands, water features, fauna, human use etc. observed along the coast were recorded. The data was also validated through ground observations (when available) and a second interpreter QA (quality analysis) was performed on each dataset (excluding Nunavik) to ensure high quality and consistency. The final dataset contains segments ranging in length from 150 metres to 2500 metres. In total, from 2010 to 2016, within the 8 study sites, about 16,800 km of shoreline were segmented.

Moored instrument time series data include current velocity, temperature, salinity, oxygen, fluorescence, transmissivity, turbidity, and particle capture of carbon, nitrogen, and silicon. Also included are sediment trap, ice drift and ice draft data. These data were collected by researchers from the Institute of Ocean Sciences, Sidney, BC, from locations ranging from the Beaufort Sea, and across the Canadian Arctic Archipelago to Baffin Bay. The data links below are only a representative sample of the entire collection. If you require more data, please send your request to the data contact.

The study involved sampling during a winter subsistence fishery at Brock Lake in November 2003, and a physical, chemical and biological assessment of the lake in July 2004 and July 2005. Data including physical, chemical and biological variables were published as Roux, M.-J., Harwood, L. A., Illasiak, J., Babaluk, J.A., and de Graff, N. 2011. Fishery resources and habitats in a headwater lake of the Brock River, NT, 2003-2005. Can. Manuscr. Rep. Fish. Aquat. Sci. 2932: viii + 61 p.

With the changing climate conditions, marine traffic along Canada’s coastal regions has increased over the past couple of decades and the need to improve our state of preparedness for oil-spill-related emergencies is critical. Baseline coastal information, such as shoreline form, substrate, and vegetation type, is required for prioritizing operations, coordinating onsite spill response activities (i.e. Shoreline Cleanup Assessment Technique [SCAT]), and providing information for wildlife and ecosystem management. Between 2013 and 2019, georeferenced high-definition videography and photos were collected for various study sites along the west coast. The study areas include the mainland, inlets, channels and islands along the BC coast starting from Kitimat in the north to Quadra Island in the south, including Haida Gwaii and North Vancouver Island in the west and Burrard Inlet in the extreme south. Data was collected during low tide conditions (where applicable) between July and September. Low-altitude helicopter surveys were conducted at each of the study site to capture video of the shoreline characteristics. In addition to acquiring videography, ground-based observations were recorded in several locations for validation. Shoreline segmentation was then carried out by manual interpretation of the oblique videography and the photos aided by ancillary data. This involved splitting and classifying the shoreline vectors based on homogeneity of the upper intertidal zone. Detailed geomorphological information (i.e. shoreline type, substrate, slope, height, accessibility etc.) describing the upper intertidal, lower intertidal, supratidal and backshore zones was extracted from the video and entered into a geospatial database using a customized data collection form. In addition, biological characteristics like biobands, water features, fauna, human use etc. observed along the coast were recorded. The data was also validated through ground samples (when available) and a second interpreter QA (quality analysis) was performed on the dataset to ensure high quality and consistency. The final dataset contains segments ranging in length from 150 metres (45 metres for study areas surveyed in 2018-19) to 2500 metres. In total, from 2013 to 2019, about 15,000 km of shoreline were segmented.

In place since fall 1994, the sentinel fisheries program is the result of a collaboration between Fisheries and Oceans Canada (DFO) and Quebec and Newfoundland commercial fishermen's associations. Under this program, contracts are awarded by tender to fishermen’s associations to carry out fishing activities according to scientific protocols developed by DFO. The main objective of this survey is to collect data that will be used to calculate abundance indices for various fish stocks, including cod, Greenland halibut, Atlantic halibut and rockfish. Description of mobile survey The mobile gear sentinel fisheries of the northern Gulf of St. Lawrence are conducted in the sub-division 3Pn and the divisions 4R, 4S and the northern part of the division 4T of the Northwest Atlantic Fisheries Organization (NAFO). This program follows a stratified random survey plan according to depth strata, NAFO divisions and the type of substrate at the bottom. A standard tow is 30 minutes long and made at a speed of 2.5 knots. The fishing gear is a 300 Star Balloon trawl mounted on a Rock Hopper footgear. The trawl mesh size is 145 mm with a liner of 40 mm in the codend. Unless conditions at sea compromise safety during fishing activity, a retaining cable must be used to standardize the horizontal opening between vessels and the various depths fished. Data are collected by observers at sea or by technicians. The data contained in this program are divided into 4 different projects. -The summer series, carried out during the month of July -The fall series, which covers the period from 1995 to 2002 -The winter series, to study the mixing between the different stocks -The CRP (Cod reproductive potential) series, which targets the reproductive potential. Data For each trait, the total catch is sorted and weighed for each species. The number of individuals caught for each unmeasured fish species is noted. Biological data such as length, weight (sampled, per individual, gonad, liver and stomach), age, sex and maturity migth then be collected on a subsample of many species such as Atlantic halibut, Greenland halibut, lumpfish and Atlantic cod, using a variety of protocols. The biological data are divided into 4 files: a “Metadata” file containing set information, a “Catches” file containing catches per set for fish taxa, a “Carbio” file containing biological and morphometric measurements per individual, a “Freql” file containing the length frequency of fish. The data collected as part of this program is available below. It is important to note, however, that 1) only traits deemed successful have been retained; 2) historical data may contain inaccuracies; 3) the most recent survey is not available for validation purposes.

This resource documents a dataset of epifauna occurrences collected in 2021 during The Knowledge and Ecosystem-Based Approach in Baffin Bay (KEBABB) program developed by the Department of Fisheries and Oceans Canada (DFO) in collaboration with university partners. The overall objective of KEBABB is to characterize the variability and trends in physical, chemical, and biological oceanographic conditions and food webs supporting fisheries in the connected ecosystems of western Baffin Bay and Lancaster Sound. In 2021, DFO expanded the KEBABB program to Barrow Strait (KEBABS-Knowledge and Ecosystem-Based Approach in Barrow Strait), a key productive area of the Tallurutiup Imanga National Marine Conservation Area. The study took place in the Eastern Canadian Arctic (mainly in Baffin Bay, Davis Strait and Barrow Strait). Sampling is done along transects at fixed stations in the study area. Catches are collected with a 1.5 m Agassiz trawl (5 mm mesh net) for 3 minutes bottom-contact time at a target speed of 1.5 knots and with a 3 m benthic beam trawl (6.4 mm mesh net) for 15 minutes bottom-contact time at a target speed of 3 knots. A total of 16 stations were sampled for epifauna in 2021 between 85-850 m depth. Epibenthic invertebrates are identified to the lowest possible taxonomic level and photographed. All unknown specimens are frozen. In the lab, the identifications are validated or refined with the photos and the frozen specimens. The data are presented in Darwin Core and are separated in two files: The “Activité_épifaune_KEBABB_epifauna_event_en” file which contains information about missions, stations and deployments, which are presented under a hierarchical activity structure. The “Occurrence_épifaune_KEBABB_epifauna_en” file that contains the taxonomic occurrences. Further details on sampling can be found in the following report: Pućko, M., Charette, J., Tremblay P., Brulotte S., St-Denis B., Ciastek S., Hedges, K., Kuzyk, Z., Roy V., and Michel, C. 2022. An ecosystem-based approach in the eastern Arctic: KEBABB/S (Knowledge and Ecosystem-Based Approach in Baffin Bay/Barrow Strait) 2021 expedition report. Can. Manuscr. Rep. Fish. Aquat. Sci. 3250: viii + 58 p. https://publications.gc.ca/collections/collection_2022/mpo-dfo/Fs97-4-3250-eng.pdf USE LIMITATION: To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.

These data sets provide information pertaining to epifauna and substrate estimates collected at dockside perimeters of floating docks located in Burrard Inlet and Fraser River Delta, British Columbia, between August and November, 2020. Data sets were compiled and formatted by Meagan Mak. Epifauna diversity was examined along surface perimeters of floating docks in Burrard Inlet and Fraser River Delta in southwestern British Columbia. Diversity estimates were obtained from video surveys collected over three depth-intervals: 1) Splash zone (SZ): depth-interval directly 15-cm above air-water interface; 2) Subsurface zone (SSZ): depth-interval (0-21 cm) below air-water interface; and 3) Deep-water zone (DZ): depth-interval below the SSZ (21-41 cm). Dock substrate consisted of combinations of wood, concrete, tires, plastic-floats, and metal, while epifauna and epiflora included anemones, tunicates, sponge, tube-worms, sea stars, bivalves, crabs, nudibranchs, urchins, barnacles, limpets, chitons, isopods, macroalgae and seagrass. Mussels ranged between 46% and 95% coverage across docks (median: 93%), while frequency of occurrence ranged between 85% and 100% (median: 99%), providing a biological-based substrate for other epifauna. The splash-zone consisted of outcropped mussels, encroached macroalgae from the waterline, and invertebrates above the waterline (limpets, chiton). If present, Ulva spp. typically formed a consistent narrow band (2-3 cm) above the waterline across all docks. Benthic (pipefish, sculpin) and pelagic (perch) fish were associated with epifaunal coverage and pelagic (open-water medium) settings. The Coast Guard Sea Island dock may experience episodic low-salinity intrusions supporting marine organisms at this site (ochre star, sculpin, limpet).